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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs1700870 chr1:219181936 C/T 0.000173 406 14.77 19.03 18.63 KM Plot
LGG rs1700872 chr1:219182679 C/T 0.000173 407 14.77 19.03 15.97 KM Plot
LGG rs1700874 chr1:219182858 C/T 0.000151 407 18.63 19.03 14.75 KM Plot
LGG rs17032046 chr12:102300819 C/G 0.000177 407 14.67 17.7 13.15 KM Plot
LGG rs17035384 chr4:157792632 A/G 1.22E-8 407 6.63 19.1 15.17 KM Plot
LGG rs17048294 chr2:114464680 T/C 0 405 15.63 14.6 0.23 KM Plot
LGG rs17053637 chr5:156011426 G/A 0.000107 406 15.6 15.32 10.53 KM Plot
LGG rs17070081 chr5:167758168 A/G 6.33E-7 400 15.83 14.6 16.82 KM Plot
LGG rs17072646 chr4:182919818 A/C 2.43E-5 407 14.8 17.45 14.1 KM Plot
LGG rs17078805 chr13:33802117 A/G 9.99E-8 407 6.83 11.03 15.73 KM Plot
LGG rs17080547 chr13:24827037 C/T 6.78E-5 404 15.18 17.73 8.07 KM Plot
LGG rs17083145 chr5:92744850 C/G 6.85E-6 403 14.93 17.2 19.2 KM Plot
LGG rs17083191 chr5:92846259 A/G 9.27E-6 407 18.57 16.17 15.17 KM Plot
LGG rs17083194 chr5:92850682 A/G 0.000178 406 15.17 16.6 17.93 KM Plot
LGG rs17083200 chr5:92851654 G/A 0.000178 406 15.17 16.6 17.93 KM Plot